pygr - Scalable bioinformatics interfaces in Python - Google Project Hosting
Welcome to pygr!
Pygr is open source software designed to make it easy to do powerful sequence and comparative genomics analyses, even with extremely large multi-genome data sets. pygr includes:
- Code for interacting with sequence databases, search methods such as BLAST, repeat-masking, megablast, etc.;
- Querying and working with sequence annotation databases and sequence alignment datasets;
- A data namespace for accessing a given resource with seamless data relationship management.
- Easy data sharing that includes transparent access over network protocols.
- High performance graph representation and query of interval-based data.
pygr is available under the New BSD license, written in Python, and actively used and developed by several groups.